STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC28Leucine rich repeat containing 28. (367 aa)    
Predicted Functional Partners:
LUM
Lumican.
  
 
 0.536
KERA
Keratocan.
  
 
 
 0.518
FMOD
Fibromodulin.
  
 
 
 0.501
PIGX
Phosphatidylinositol glycan anchor biosynthesis class X.
  
 
 
 0.489
CHAD
Chondroadherin.
  
 
 
 0.488
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
  
 
 
 0.473
LOC102156225
Uncharacterized protein.
  
 
 
 0.459
LRRC59
Leucine rich repeat containing 59.
  
 
   0.450
LINGO4
Leucine rich repeat and Ig domain containing 4.
  
 
 
 0.434
LRRC32
Leucine rich repeat containing 32.
  
 
 
 0.416
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.