STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TC2NTandem C2 domains, nuclear. (490 aa)    
Predicted Functional Partners:
CATSPER3
Cation channel sperm associated 3.
    
 
 0.827
CATSPER2
Cation channel sperm associated 2.
    
 
 0.812
TMEM200A
Transmembrane protein 200A.
      
 0.615
WDR48
WD repeat domain 48.
      
 0.614
PIWIL3
Piwi like RNA-mediated gene silencing 3; Belongs to the argonaute family.
      
 0.549
TRIM27
Tripartite motif containing 27.
    
 
 0.532
CATSPER4
Cation channel sperm associated 4.
      
 0.518
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
   
  
 0.483
SH3PXD2A
SH3 and PX domains 2A.
    
 
 0.476
OTUD3
OTU deubiquitinase 3.
      
 0.471
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.