STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM38Tripartite motif containing 38. (462 aa)    
Predicted Functional Partners:
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 
 0.769
TAB3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 
 0.748
RHOU
Ras homolog family member U.
    
 0.615
RIOK3
Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses.
      
 0.592
FAM222A
Family with sequence similarity 222 member A.
      
 0.592
NHLH2
Nescient helix-loop-helix 2.
      
 0.591
RNF4
Ring finger protein 4.
    
 
 0.564
DDX58
DExD/H-box helicase 58.
   
 0.543
TRIM56
Tripartite motif containing 56.
   
  
 0.529
DHX15
DEAH-box helicase 15.
    
 
 0.528
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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