STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCERG1LTranscription elongation regulator 1 like. (569 aa)    
Predicted Functional Partners:
POLR1D
RNA polymerase I and III subunit D.
      
 0.813
DPYSL4
Dihydropyrimidinase like 4.
   
  
 0.805
RBM22
RNA binding motif protein 22.
   
 
 0.797
DDX46
DEAD-box helicase 46.
   
 
 0.779
U2SURP
U2 snRNP associated SURP domain containing.
   
   0.777
MFAP1
Microfibril associated protein 1.
   
 
 0.737
PRPF38A
Pre-mRNA processing factor 38A.
   
 
 0.726
SF3B4
Splicing factor 3b subunit 4.
    
 
 0.719
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.717
SGSM1
Small G protein signaling modulator 1.
      
 0.701
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.