STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM5RNA binding motif protein 5. (815 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain containing 1.
   
0.948
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
   
 
 0.901
DDX5
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.883
RBM39
RNA binding motif protein 39.
   
  0.877
SRRM2
Serine/arginine repetitive matrix 2.
   
 
 0.869
DHX9
DExH-box helicase 9.
   
 0.839
SRRT
Serrate, RNA effector molecule.
   
 
  0.838
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 
 0.832
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.826
HTATSF1
Uncharacterized protein.
   
 
 0.825
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.