STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD2Chromodomain helicase DNA binding protein 2. (1827 aa)    
Predicted Functional Partners:
ZNF618
Zinc finger protein 618.
    
 
 0.715
RBFOX2
RNA binding fox-1 homolog 2.
      
 0.671
KMT2E
Lysine methyltransferase 2E.
   
 
 0.600
RSF1
Remodeling and spacing factor 1.
   
 
 0.587
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.580
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.571
PHF20
PHD finger protein 20.
   
 
 0.564
SUPT5H
Transcription elongation factor SPT5.
   
 
 0.556
ZNF131
Zinc finger protein 131.
   
 
 0.553
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.546
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.