STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAV29DV5T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene). (155 aa)    
Predicted Functional Partners:
E2RKE1_CANLF
Ig-like domain-containing protein.
  
  
  0.603
ENSCAFP00000049670
Ig-like domain-containing protein.
  
  
  0.600
F1PK42_CANLF
Ig-like domain-containing protein.
  
  
  0.584
J9NXD9_CANLF
Ig-like domain-containing protein.
  
  
  0.577
E2R5X5_CANLF
IGv domain-containing protein.
  
  
  0.550
ENSCAFP00000049852
Ig-like domain-containing protein.
  
 
  0.550
ENSCAFP00000053644
Ig-like domain-containing protein.
  
  
  0.532
ENSCAFP00000065986
Ig-like domain-containing protein.
  
  
  0.512
E2QRQ7_CANLF
Ig-like domain-containing protein.
   
 
  0.502
TRBV12-5
T cell receptor beta variable 12-5.
   
 
  0.502
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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