STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB3GAP2RAB3 GTPase activating non-catalytic protein subunit 2. (1540 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
 
 0.997
TBC1D20
TBC1 domain family member 20.
      
 0.929
RAB18
RAB18, member RAS oncogene family.
      
 0.887
VAPB
VAMP associated protein B and C.
   
 
 0.825
REEP4
Receptor expression-enhancing protein.
      
 0.757
TMCO4
Transmembrane and coiled-coil domains 4.
      
 0.734
ANKRD52
Ankyrin repeat domain 52.
   
  
 0.697
FAM133B-2
Family with sequence similarity 133 member B.
      
 0.690
FAM133B
Family with sequence similarity 133 member B.
      
 0.690
C2CD2
C2 calcium dependent domain containing 2.
      
 0.681
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.