SNRNP40 protein (Canis lupus familiaris) - STRING interaction network

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Score

SNRNP40

Small nuclear ribonucleoprotein U5 subunit 40. (382 aa)

Predicted Functional Partners:

PRPF8

0.983

EFTUD2

0.978

PRPF6

0.975

DDX23

0.971

PRPF4

0.964

PRPF3

0.963

TSSC4

0.963

CD2BP2

0.961

SNRNP200

0.957

SNRPD2-2

0.914

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD2BP2	DDX23	ENSCAFP00000050039	ENSCAFP00000012855	CD2 cytoplasmic tail binding protein 2.	DEAD-box helicase 23.	0.987
CD2BP2	EFTUD2	ENSCAFP00000050039	ENSCAFP00000020765	CD2 cytoplasmic tail binding protein 2.	Elongation factor Tu GTP binding domain containing 2.	0.974
CD2BP2	PRPF3	ENSCAFP00000050039	ENSCAFP00000017399	CD2 cytoplasmic tail binding protein 2.	Pre-mRNA processing factor 3.	0.806
CD2BP2	PRPF4	ENSCAFP00000050039	ENSCAFP00000004803	CD2 cytoplasmic tail binding protein 2.	Pre-mRNA processing factor 4.	0.739
CD2BP2	PRPF6	ENSCAFP00000050039	ENSCAFP00000055477	CD2 cytoplasmic tail binding protein 2.	Pre-mRNA processing factor 6.	0.963
CD2BP2	PRPF8	ENSCAFP00000050039	ENSCAFP00000028357	CD2 cytoplasmic tail binding protein 2.	Pre-mRNA processing factor 8.	0.996
CD2BP2	SNRNP200	ENSCAFP00000050039	ENSCAFP00000065424	CD2 cytoplasmic tail binding protein 2.	Small nuclear ribonucleoprotein U5 subunit 200.	0.950
CD2BP2	SNRNP40	ENSCAFP00000050039	ENSCAFP00000016429	CD2 cytoplasmic tail binding protein 2.	Small nuclear ribonucleoprotein U5 subunit 40.	0.961
CD2BP2	SNRPD2-2	ENSCAFP00000050039	ENSCAFP00000000897	CD2 cytoplasmic tail binding protein 2.	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.981
CD2BP2	TSSC4	ENSCAFP00000050039	ENSCAFP00000039728	CD2 cytoplasmic tail binding protein 2.	Tumor suppressing subtransferable candidate 4.	0.923
DDX23	CD2BP2	ENSCAFP00000012855	ENSCAFP00000050039	DEAD-box helicase 23.	CD2 cytoplasmic tail binding protein 2.	0.987
DDX23	EFTUD2	ENSCAFP00000012855	ENSCAFP00000020765	DEAD-box helicase 23.	Elongation factor Tu GTP binding domain containing 2.	0.996
DDX23	PRPF3	ENSCAFP00000012855	ENSCAFP00000017399	DEAD-box helicase 23.	Pre-mRNA processing factor 3.	0.974
DDX23	PRPF4	ENSCAFP00000012855	ENSCAFP00000004803	DEAD-box helicase 23.	Pre-mRNA processing factor 4.	0.968
DDX23	PRPF6	ENSCAFP00000012855	ENSCAFP00000055477	DEAD-box helicase 23.	Pre-mRNA processing factor 6.	0.993
DDX23	PRPF8	ENSCAFP00000012855	ENSCAFP00000028357	DEAD-box helicase 23.	Pre-mRNA processing factor 8.	0.993
DDX23	SNRNP200	ENSCAFP00000012855	ENSCAFP00000065424	DEAD-box helicase 23.	Small nuclear ribonucleoprotein U5 subunit 200.	0.970
DDX23	SNRNP40	ENSCAFP00000012855	ENSCAFP00000016429	DEAD-box helicase 23.	Small nuclear ribonucleoprotein U5 subunit 40.	0.971
DDX23	SNRPD2-2	ENSCAFP00000012855	ENSCAFP00000000897	DEAD-box helicase 23.	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.912
DDX23	TSSC4	ENSCAFP00000012855	ENSCAFP00000039728	DEAD-box helicase 23.	Tumor suppressing subtransferable candidate 4.	0.908