STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUM1Pumilio RNA binding family member 1. (1224 aa)    
Predicted Functional Partners:
PUM2
Pumilio RNA binding family member 2.
   
  0.972
ATXN1
Ataxin 1.
     
 0.896
ATXN1L
Ataxin 1 like.
     
 0.883
CLINT1
Clathrin interactor 1.
   
 
 0.863
FUBP3
Far upstream element binding protein 3.
   
 
 0.812
MRPL19
Mitochondrial ribosomal protein L19.
    
 
 0.802
NANOS1
Nanos-type domain-containing protein; Belongs to the nanos family.
   
 
 0.789
COX17
Cytochrome c oxidase copper chaperone; Copper metallochaperone essential for the assembly of the mitochondrial respiratory chain complex IV (CIV), also known as cytochrome c oxidase. Binds two copper ions and delivers them to the metallochaperone SCO1 which transports the copper ions to the Cu(A) site on the cytochrome c oxidase subunit II (MT-CO2/COX2).
    
 
 0.754
SUPV3L1
Suv3 like RNA helicase.
    
 
 0.724
NANOS3
Nanos C2HC-type zinc finger 3; Belongs to the nanos family.
   
 
 0.713
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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