STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRSS56Serine protease 56; Belongs to the peptidase S1 family. (616 aa)    
Predicted Functional Partners:
TMEM98
Transmembrane protein 98.
      
 0.909
STOX2
Storkhead box 2.
      
 0.868
NEPRO
Nucleolus and neural progenitor protein.
      
 0.834
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.819
ARHGAP42
Rho GTPase activating protein 42.
      
 0.814
B4GALNT2
Beta-1,4-N-acetyl-galactosaminyltransferase 2.
      
 0.789
cOR1P2
Olfactory receptor.
      
 0.740
MFRP
Membrane frizzled-related protein.
    
 
 0.710
UVSSA
UV stimulated scaffold protein A.
      
 0.699
MEIOC
Meiosis specific with coiled-coil domain.
      
 0.685
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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