STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUDPPseudouridine 5'-phosphatase. (231 aa)    
Predicted Functional Partners:
PGGHG
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.908
LOC607355
Aminotran_5 domain-containing protein.
    
 0.862
LOC100855679
Aminotran_5 domain-containing protein.
    
 0.862
PNPLA4
Patatin like phospholipase domain containing 4.
      
 0.856
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.853
ENSCAFP00000050733
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.853
YIPF6
Protein YIPF.
  
 
 0.848
MPI
Mannose-6-phosphate isomerase.
  
 0.837
GALT
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
    
 0.803
NSUN2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
     
 0.801
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.