STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX9LIM homeobox 9. (397 aa)    
Predicted Functional Partners:
LDB2
LIM domain binding 2.
    
 
 0.798
LDB1
LIM domain binding 1.
    
 
 0.658
BARHL2
BarH like homeobox 2.
   
 
 0.616
BARHL1
BarH like homeobox 1.
   
 
 0.615
EMX2
Empty spiracles homeobox 2.
      
0.579
NKX6-2
NK6 homeobox 2.
    
 
 0.573
CBX2
Chromobox 2.
   
  
 0.561
EBF2
EBF transcription factor 2.
   
  
 0.559
DBX1
Developing brain homeobox 1.
   
 
 0.558
ATOH1
Atonal bHLH transcription factor 1.
   
  
 0.546
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.