OR10J5 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OR10J5

Olfactory receptor. (310 aa)

Predicted Functional Partners:

GNAL

0.665

GNB1

0.546

GNG13

0.539

RTP2

0.414

RTP1

0.412

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNAL	GNB1	ENSCAFP00000053739	ENSCAFP00000028342	G protein subunit alpha L.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.970
GNAL	GNG13	ENSCAFP00000053739	ENSCAFP00000029000	G protein subunit alpha L.	G protein subunit gamma 13.	0.954
GNAL	OR10J5	ENSCAFP00000053739	ENSCAFP00000017284	G protein subunit alpha L.	Olfactory receptor.	0.665
GNAL	RTP1	ENSCAFP00000053739	ENSCAFP00000020187	G protein subunit alpha L.	Receptor transporter protein 1.	0.574
GNB1	GNAL	ENSCAFP00000028342	ENSCAFP00000053739	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	G protein subunit alpha L.	0.970
GNB1	GNG13	ENSCAFP00000028342	ENSCAFP00000029000	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	G protein subunit gamma 13.	0.960
GNB1	OR10J5	ENSCAFP00000028342	ENSCAFP00000017284	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Olfactory receptor.	0.546
GNG13	GNAL	ENSCAFP00000029000	ENSCAFP00000053739	G protein subunit gamma 13.	G protein subunit alpha L.	0.954
GNG13	GNB1	ENSCAFP00000029000	ENSCAFP00000028342	G protein subunit gamma 13.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.960
GNG13	OR10J5	ENSCAFP00000029000	ENSCAFP00000017284	G protein subunit gamma 13.	Olfactory receptor.	0.539
GNG13	RTP1	ENSCAFP00000029000	ENSCAFP00000020187	G protein subunit gamma 13.	Receptor transporter protein 1.	0.485
GNG13	RTP2	ENSCAFP00000029000	ENSCAFP00000020471	G protein subunit gamma 13.	Receptor transporter protein 2.	0.482
OR10J5	GNAL	ENSCAFP00000017284	ENSCAFP00000053739	Olfactory receptor.	G protein subunit alpha L.	0.665
OR10J5	GNB1	ENSCAFP00000017284	ENSCAFP00000028342	Olfactory receptor.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.546
OR10J5	GNG13	ENSCAFP00000017284	ENSCAFP00000029000	Olfactory receptor.	G protein subunit gamma 13.	0.539
OR10J5	RTP1	ENSCAFP00000017284	ENSCAFP00000020187	Olfactory receptor.	Receptor transporter protein 1.	0.412
OR10J5	RTP2	ENSCAFP00000017284	ENSCAFP00000020471	Olfactory receptor.	Receptor transporter protein 2.	0.414
RTP1	GNAL	ENSCAFP00000020187	ENSCAFP00000053739	Receptor transporter protein 1.	G protein subunit alpha L.	0.574
RTP1	GNG13	ENSCAFP00000020187	ENSCAFP00000029000	Receptor transporter protein 1.	G protein subunit gamma 13.	0.485
RTP1	OR10J5	ENSCAFP00000020187	ENSCAFP00000017284	Receptor transporter protein 1.	Olfactory receptor.	0.412