STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRLNeural retina leucine zipper. (257 aa)    
Predicted Functional Partners:
CRX
Cone-rod homeobox protein; Transcription factor that binds and transactivates the sequence 5'-TAATC[CA]-3' which is found upstream of several photoreceptor-specific genes, including the opsin genes. Acts synergistically with other transcription factors, such as NRL, RORB and RAX, to regulate photoreceptor cell-specific gene transcription. Essential for the maintenance of mammalian photoreceptors (By similarity); Belongs to the paired homeobox family.
   
 
 0.803
TRPT1
tRNA phosphotransferase 1.
   
  
 0.784
VXN
Vexin.
      
 0.783
FIZ1
FLT3 interacting zinc finger 1.
    
 
 0.779
SP4
Sp4 transcription factor.
    
 
 0.767
NR2E3
NR LBD domain-containing protein.
    
 
 0.764
ZNF784
Zinc finger protein 784.
    
 
 0.739
PIGN
Phosphatidylinositol glycan anchor biosynthesis class N.
      
 0.730
RAX
Retina and anterior neural fold homeobox.
    
 
 0.725
THRB
Thyroid hormone receptor beta.
    
 
 0.667
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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