STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM9SF1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (606 aa)    
Predicted Functional Partners:
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
   
 
 0.876
CHMP2A
Charged multivesicular body protein 2A.
   
 
 0.829
CHMP3
Uncharacterized protein.
   
 
 0.827
NSA2
Uncharacterized protein.
      
 0.827
SZRD1
SUZ RNA binding domain containing 1.
      
 0.811
CHMP1A
Charged multivesicular body protein 1A.
   
 
 0.781
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 
 0.686
VPS4A
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.683
GOPC
Golgi associated PDZ and coiled-coil motif containing.
    
 
 0.673
CHMP5
Uncharacterized protein.
   
 
 0.671
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.