STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD5PiggyBac transposable element derived 5. (458 aa)    
Predicted Functional Partners:
PGBD1
PiggyBac transposable element derived 1.
    
 
 0.939
GIN1
Gypsy retrotransposon integrase 1.
   
 
 0.884
XKR7
XK-related protein.
      
 0.879
PGBD2
PiggyBac transposable element derived 2.
    
 
 0.839
TMEM145
Transmembrane protein 145.
   
  
 0.825
ZBED1
Zinc finger BED-type containing 1.
   
 
 0.805
POGK
Pogo transposable element derived with KRAB domain.
      
 0.802
THAP9
THAP domain containing 9.
    
 
 0.791
ZNF862
Zinc finger protein 862.
    
 
 0.738
NYNRIN
NYN domain and retroviral integrase containing.
    
 
 0.725
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.