STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1PNJ5_CANLFZnF_CDGSH domain-containing protein. (106 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 
 0.706
UBQLN3
Ubiquilin 3.
      
 0.704
UBQLN4
Ubiquilin 4.
      
 0.685
TOMM70
Translocase of outer mitochondrial membrane 70.
      
 0.681
DDA1
DET1 and DDB1 associated 1.
    
 
 0.632
HSD17B10
Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.597
FAF2
Fas associated factor family member 2.
      
 0.564
CISD3
CDGSH iron sulfur domain 3.
   
  
 0.552
RABGEF1
RAB guanine nucleotide exchange factor 1.
    
 
 0.537
CCDC58
Coiled-coil domain containing 58.
   
  
 0.537
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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