STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42SE1CDC42 small effector 1. (79 aa)    
Predicted Functional Partners:
PNPLA4
Patatin like phospholipase domain containing 4.
      
 0.926
TMED2
Transmembrane p24 trafficking protein 2.
      
 0.877
ATP6V1F
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
  
 0.805
FAM104A
Family with sequence similarity 104 member A.
   
  
 0.721
BAIAP2L1
BAI1 associated protein 2 like 1.
   
  
 0.692
CDC42BPB
CDC42 binding protein kinase beta; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
  
 0.692
SYNGAP1
Synaptic Ras GTPase activating protein 1.
      
 0.637
FLII
FLII actin remodeling protein.
      
 0.637
BAIAP2
BAI1 associated protein 2.
   
  
 0.636
BPHL
Biphenyl hydrolase like.
      
 0.633
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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