STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNPEPL1Arginyl aminopeptidase like 1. (560 aa)    
Predicted Functional Partners:
CLYBL
Citrate lyase beta like.
    
 
 0.699
ATP6V1H
ATPase H+ transporting V1 subunit H.
   
  
 0.685
HOXC12
Homeobox C12.
   
  
 0.678
CAPN10
Calpain 10; Belongs to the peptidase C2 family.
   
  
 0.660
HOXC11
Homeobox C11.
      
 0.648
RGS20
Regulator of G protein signaling 20.
      
 0.587
HOXC5
Homeobox C5.
   
  
 0.577
HOXC6
Homeobox C6.
      
 0.561
PREP
Prolyl endopeptidase.
  
  
 0.552
PDE5A
cGMP-specific 3',5'-cyclic phosphodiesterase; Plays a role in signal transduction by regulating the intracellular concentration of cyclic nucleotides. This phosphodiesterase catalyzes the specific hydrolysis of cGMP to 5'-GMP. Specifically regulates nitric-oxide-generated cGMP.
      
 0.517
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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