STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR45BWD repeat domain 45B. (344 aa)    
Predicted Functional Partners:
RAB40B
RAB40B, member RAS oncogene family.
 
 
  
 0.909
C5H16orf70
Chromosome 5 C16orf70 homolog.
   
  
 0.750
BCAS3
BCAS3 microtubule associated cell migration factor.
   
  
 0.718
ZFYVE1
Zinc finger FYVE-type containing 1.
    
 
 0.661
PEX1
Peroxisomal biogenesis factor 1.
    
 
 0.646
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 
0.620
SGSM2
Small G protein signaling modulator 2.
      
 0.591
ATG2A
Autophagy related 2A.
    
 
 0.587
ATG2B
Autophagy related 2B.
    
 
 0.577
SH3GLB2
SH3 domain containing GRB2 like, endophilin B2.
   
  
 0.527
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.