STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATZ1POZ/BTB and AT hook containing zinc finger 1. (687 aa)    
Predicted Functional Partners:
ACOT4
Acyl-CoA thioesterase 6.
   
 
 0.642
LRRC4
Leucine rich repeat containing 4.
    
 
 0.627
SPZ1
Spermatogenic leucine zipper 1.
    
 
 0.578
GABPA
GA binding protein transcription factor subunit alpha.
    
 
 0.568
F1PCP5_CANLF
Uncharacterized protein.
    
 
 0.565
MRPL48
Ribosomal_S10 domain-containing protein.
    
 
 0.565
ENSCAFP00000051216
Uncharacterized protein.
    
 
 0.565
PTPRR
Protein tyrosine phosphatase receptor type R.
   
 
 0.562
VEPH1
Ventricular zone expressed PH domain containing 1.
      
 0.562
C18H11orf95
Chromosome 18 C11orf95 homolog.
    
 
 0.545
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.