STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC85BCoiled-coil domain containing 85B. (202 aa)    
Predicted Functional Partners:
ZNF358
Zinc finger protein 358.
   
  
 0.771
SOX18
SRY-box 18.
    
 
 0.639
ZNF575
Zinc finger protein 575.
      
 0.553
ZNF771
Zinc finger protein 771.
   
  
 0.526
TRIP6
Thyroid hormone receptor interactor 6.
      
 0.525
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
      
 0.515
ZNF296
Zinc finger protein 296.
   
  
 0.515
ZNF75D
Zinc finger protein 75D.
      
 0.515
CCDC59
Coiled-coil domain containing 59.
   
  
 0.515
PKIA
cAMP-dependent protein kinase inhibitor alpha.
      
 0.514
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.