STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCHD1Patched domain containing 1. (888 aa)    
Predicted Functional Partners:
DDX53
Uncharacterized protein; Belongs to the DEAD box helicase family.
      
 0.870
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
      
 0.766
FAM3C
Family with sequence similarity 3 member C.
      
 0.679
CBLN1
Cerebellin 1 precursor.
      
 0.672
SLC16A2
Solute carrier family 16 member 2.
      
 0.663
SYT2
Synaptotagmin 2.
      
 0.647
DPP10
Dipeptidyl peptidase like 10; Belongs to the peptidase S9B family.
   
  
 0.588
DPP6
Dipeptidyl peptidase like 6; Belongs to the peptidase S9B family.
   
  
 0.588
CADPS2
Calcium dependent secretion activator 2.
      
 0.570
SLC10A4
Solute carrier family 10 member 4.
      
 0.564
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.