STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM69Tripartite motif containing 69. (500 aa)    
Predicted Functional Partners:
TRIM42
Tripartite motif containing 42.
   
  
 0.706
TRIM47
Tripartite motif containing 47.
   
  
 0.696
TRIM66
Tripartite motif containing 66.
      
 0.671
ZBED9
Zinc finger BED-type containing 9.
   
 
 0.661
GRM5
Glutamate metabotropic receptor 5.
   
  
 0.607
TRIM54
Tripartite motif containing 54.
    
 
 0.597
TDGF1
EGF-like domain-containing protein.
    
 
 0.593
TRIM23
Tripartite motif containing 23.
    
 
 0.591
FAM209B
Uncharacterized protein.
   
 
 0.574
TRIM46
Tripartite motif containing 46.
      
0.557
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.