STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM42Transmembrane protein 42. (342 aa)    
Predicted Functional Partners:
ZDHHC3
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.877
WFDC5
WAP four-disulfide core domain 5.
   
  
 0.805
TMEM176A
Transmembrane protein 176A.
      
 0.616
KCNS1
Potassium voltage-gated channel modifier subfamily S member 1; Belongs to the potassium channel family.
   
  
 0.578
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.534
ENSCAFP00000053122
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.534
SEC24C
SEC24 homolog C, COPII coat complex component.
      
 0.482
SEC24A
SEC24 homolog A, COPII coat complex component.
      
 0.480
BPIFB1
BPI fold containing family B member 1.
   
  
 0.431
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.