STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A1Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1206 aa)    
Predicted Functional Partners:
DNAH1
Dynein axonemal heavy chain 1.
      
 0.707
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
   
 
 0.706
BRPF1
Bromodomain and PHD finger containing 1.
   
  
 0.705
SGSM3
Small G protein signaling modulator 3.
   
  
 0.699
SPTBN4
Spectrin beta, non-erythrocytic 4.
    
 
 0.681
ARHGEF1
DH domain-containing protein.
   
  
 0.680
PCNX3
Pecanex 3.
   
    0.654
ATP5MC2
ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.
   
  
 0.586
SPTBN4-2
Uncharacterized protein.
    
 
 0.578
NHLRC2
NHL repeat containing 2.
    
 
 0.572
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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