STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX1T-box transcription factor 1. (413 aa)    
Predicted Functional Partners:
GNB1L
G protein subunit beta 1 like.
      
 0.843
CFAP54
Cilia and flagella associated protein 54.
   
  
 0.818
MRPL40
Mitochondrial ribosomal protein L40.
      
 0.674
RCHY1
Ring finger and CHY zinc finger domain containing 1.
   
    0.665
ENSCAFP00000058950
Uncharacterized protein.
   
    0.665
TBCE
Tubulin folding cofactor E.
      
 0.604
NEBL
Nebulette.
      
 0.573
PRDM16
PR/SET domain 16.
   
  
 0.562
ZNF408
Zinc finger protein 408.
   
  
 0.540
TMEM26
Transmembrane protein 26.
      
 0.539
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.