STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUNDC1RUN domain containing 1. (613 aa)    
Predicted Functional Partners:
AARSD1
Uncharacterized protein.
      
 0.669
VPS54
VPS54 subunit of GARP complex.
   
  
 0.539
PEX11G
Peroxisomal biogenesis factor 11 gamma.
   
  
 0.526
CHCHD5
Coiled-coil-helix-coiled-coil-helix domain containing 5.
   
  
 0.516
WSB1
WD repeat and SOCS box containing 1.
   
  
 0.515
OXSR1
Oxidative stress responsive kinase 1.
      
 0.513
CADPS
Calcium dependent secretion activator.
      
 0.495
CADPS2
Calcium dependent secretion activator 2.
      
 0.495
TBC1D9
TBC1 domain family member 9.
   
  
 0.490
LRRC46
Leucine rich repeat containing 46.
   
  
 0.489
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.