STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGDRProstaglandin D2 receptor. (358 aa)    
Predicted Functional Partners:
PCYOX1
Prenylcysteine oxidase 1.
      
 0.670
AGTRAP
Angiotensin II receptor associated protein.
    
 
 0.646
CYSLTR1
Cysteinyl leukotriene receptor 1.
   
  
 0.563
ZNF41
Zinc finger protein 41.
      
 0.535
CNOT7
CCR4-NOT transcription complex subunit 7.
   
  
 0.518
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.517
WDR13
WD repeat domain 13.
   
  
 0.515
RXRB
Retinoic acid receptor RXR-beta; Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The RAR/RXR heterodimers bind to the retinoic acid response elements (RARE); Belongs to the nuclear hormone receptor family. NR2 subfamily.
      
 0.514
PAPLN
Papilin, proteoglycan like sulfated glycoprotein.
    
 
 0.488
MTRF1L
Mitochondrial translational release factor 1 like.
      
 0.487
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.