Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RBM10RNA binding motif protein 10. (907 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.957
GPKOW
G-patch domain and KOW motifs.
   
 
 0.951
SUGP1
SURP and G-patch domain containing 1.
   
 
 0.949
DHX15
DEAH-box helicase 15.
   
 
 0.942
DHX38
DEAH-box helicase 38.
   
 
 0.935
SF3B4
Splicing factor 3b subunit 4.
    
 
 0.883
PTBP2
Polypyrimidine tract binding protein 2.
   
 
 0.859
U2SURP
U2 snRNP associated SURP domain containing.
   
 
 0.858
SF3A1
Splicing factor 3a subunit 1.
   
 
 0.854
PRPF19
Pre-mRNA processing factor 19.
   
 
 0.844
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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