STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC23A3Solute carrier family 23 member 3. (603 aa)    
Predicted Functional Partners:
NHEJ1
Non-homologous end joining factor 1.
 
      0.712
XRCC5
X-ray repair cross complementing 5.
    
 
 0.702
LIG4
DNA ligase.
   
 
 0.514
SLC5A9
Solute carrier family 5 member 9; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.509
SLC7A4
Solute carrier family 7 member 4.
   
  
 0.487
XRCC6
X-ray repair cross complementing 6.
    
 
 0.487
SLC16A9
Solute carrier family 16 member 9.
   
  
 0.478
CNPPD1
Cyclin Pas1/PHO80 domain containing 1.
 
      0.467
SLC39A4
Solute carrier family 39 member 4.
   
 
 0.466
SLC25A27
Solute carrier family 25 member 27; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.461
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.