STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN11Tetraspanin. (300 aa)    
Predicted Functional Partners:
GHITM
Growth hormone inducible transmembrane protein; Belongs to the BI1 family.
      
 0.708
ZBTB8B
Uncharacterized protein.
      
 0.681
NOL10
Nucleolar protein 10.
      
 0.666
PKHD1L1
PKHD1 like 1.
      
 0.650
KIAA0513
KIAA0513.
    
 
 0.589
RAB39A
RAB39A, member RAS oncogene family.
      
 0.564
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 
 0.551
TXNL4A
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
   
  
 0.542
ENSCAFP00000057191
Uncharacterized protein.
   
  
 0.542
TXNL4B
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
   
  
 0.525
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.