STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD5OTU deubiquitinase 5. (571 aa)    
Predicted Functional Partners:
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.945
STAMBP
STAM binding protein.
 
 
  
 0.764
RPS27A
Ubiquitin-like domain-containing protein.
   
 
 0.700
ENSCAFP00000050780
Ubiquitin-like domain-containing protein.
    
 
 0.700
VCPIP1
Valosin containing protein interacting protein 1.
   
 
 0.699
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
    0.656
UBB
Ubiquitin B.
    
 
 0.630
LOC100685053
Ubiquitin-like domain-containing protein.
    
 
 0.630
OTUD7A
OTU deubiquitinase 7A.
    
 
 0.591
OTUD7B
OTU deubiquitinase 7B.
    
 
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.