STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PADI2Peptidyl arginine deiminase 2. (634 aa)    
Predicted Functional Partners:
KIAA0100
KIAA0100.
   
  
 0.664
LOC111090006
Histone H3; Belongs to the histone H3 family.
    
 0.510
LOC488263
Histone H3; Belongs to the histone H3 family.
    
 0.510
LIMS2
LIM zinc finger domain containing 2.
   
  
 0.501
PHYHIP
Phytanoyl-CoA 2-hydroxylase interacting protein.
   
  
 0.497
LRRC14
Leucine rich repeat containing 14.
      
 0.487
RNF34
Ring finger protein 34.
      
 0.487
WDR74
WD repeat domain 74.
      
 0.487
TESPA1
Thymocyte expressed, positive selection associated 1.
   
  
 0.487
AIG1
Androgen induced 1.
      
 0.485
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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