STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA9Cholinergic receptor nicotinic alpha 9 subunit. (526 aa)    
Predicted Functional Partners:
LYNX1
UPAR/Ly6 domain-containing protein.
     
 0.915
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.764
PDS5A
Uncharacterized protein.
   
  
 0.711
N4BP2
NEDD4 binding protein 2.
      
 0.696
RBM47
RNA-binding protein 47.
   
  
 0.685
CHRNA7
Uncharacterized protein.
  
0.667
TCTEX1D1
Tctex1 domain containing 1.
      
 0.652
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
  
 
0.644
CHRNA3
Cholinergic receptor nicotinic alpha 3 subunit.
  
 
0.632
LIAS
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
      
 0.630
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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