STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYDE1Synapse defective Rho GTPase homolog 1. (735 aa)    
Predicted Functional Partners:
MEIOC
Meiosis specific with coiled-coil domain.
      
 0.770
ILVBL
IlvB acetolactate synthase like; Belongs to the TPP enzyme family.
      
 0.729
BARX1
BARX homeobox 1.
   
  
 0.663
NR6A1-2
Nuclear receptor subfamily 6 group A member 1.
      
 0.637
EPHX3
Epoxide hydrolase 3.
      
 0.563
PDIK1L
PDLIM1 interacting kinase 1 like; Belongs to the protein kinase superfamily.
      
 0.559
BRMS1L
BRMS1 like transcriptional repressor.
      
 0.555
TMEM151A
Transmembrane protein 151A.
   
  
 0.522
CD99L2
CD99 molecule like 2.
      
 0.517
RHOF
Ras homolog family member F, filopodia associated.
    
 0.503
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.