STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF488Zinc finger protein 488. (401 aa)    
Predicted Functional Partners:
WDR64
Uncharacterized protein.
    
 
 0.484
TBC1D16
TBC1 domain family member 16.
   
  
 0.484
PLCH1
Phosphoinositide phospholipase C.
    
 
 0.484
BFSP2
Transmembrane protein 108.
      
 0.481
EPB41L4A
Erythrocyte membrane protein band 4.1 like 4A.
      
 0.481
VPS45
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.480
COPS7B
COP9 signalosome subunit 7B.
      
 0.480
NALCN
Sodium leak channel, non-selective.
   
  
 0.479
SORCS3
Sortilin related VPS10 domain containing receptor 3.
    
 
 0.425
PDE11A
Phosphodiesterase.
    
 
 0.413
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.