STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NWD2NACHT and WD repeat domain containing 2. (1742 aa)    
Predicted Functional Partners:
WDR93
WD repeat domain 93.
      
 0.854
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
      
 0.802
SPSB4
SplA/ryanodine receptor domain and SOCS box containing 4.
      
 0.796
PEX11A
Peroxisomal biogenesis factor 11 alpha.
   
  
 0.757
DLGAP1
DLG associated protein 1.
   
  
 0.713
CWH43
Cell wall biogenesis 43 C-terminal homolog.
      
 0.708
FAM184B
Family with sequence similarity 184 member B.
   
 
 0.699
ARHGAP12
Rho GTPase activating protein 12.
      
 0.681
RAPGEF2
Rap guanine nucleotide exchange factor 2; Functions as a guanine nucleotide exchange factor (GEF), which activates Rap and Ras family of small GTPases by exchanging bound GDP for free GTP in a cAMP-dependent manner. Serves as a link between cell surface receptors and Rap/Ras GTPases in intracellular signaling cascades. Acts also as an effector for Rap1 by direct association with Rap1-GTP thereby leading to the amplification of Rap1-mediated signaling. Shows weak activity on HRAS. It is controversial whether RAPGEF2 binds cAMP and cGMP or not. Its binding to ligand-activated beta-1 adre [...]
      
 0.676
PXYLP1
2-phosphoxylose phosphatase 1; Belongs to the histidine acid phosphatase family.
  
   
 0.574
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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