STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD6AOTU deubiquitinase 6A. (286 aa)    
Predicted Functional Partners:
UCHL3
Ubiquitin carboxyl-terminal hydrolase.
      
 0.762
VCPIP1
Valosin containing protein interacting protein 1.
   
 
 0.678
GAPT
GRB2 binding adaptor protein, transmembrane.
      
 0.676
HSBP1L1
Heat shock factor binding protein 1 like 1.
      
 0.648
HSBP1
Heat shock factor binding protein 1.
      
 0.642
OTOR
Otoraplin.
   
  
 0.621
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 
 0.573
OTUD3
OTU deubiquitinase 3.
   
  
0.545
OTUD5
OTU deubiquitinase 5.
   
  
0.536
USP35
Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family.
   
  
 0.525
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.