STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD15Sterile alpha motif domain containing 15. (88 aa)    
Predicted Functional Partners:
TOMM7
Translocase of outer mitochondrial membrane 7.
   
 
 0.847
TOMM70
Translocase of outer mitochondrial membrane 70.
   
 
 0.682
SAMM50
SAMM50 sorting and assembly machinery component.
   
 
 0.676
TOMM40
Translocase of outer mitochondrial membrane 40.
   
 
 0.629
PVR
PVR cell adhesion molecule.
   
 
 0.629
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 
 0.629
TOMM20
Translocase of outer mitochondrial membrane 20.
   
 
 0.628
TOMM20L
Translocase of outer mitochondrial membrane 20 like.
   
 
 0.628
LOC608513
CheR domain-containing protein.
   
 
 0.628
TOMM5
Uncharacterized protein.
   
 
 0.617
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.