STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGSF6Immunoglobulin superfamily member 6. (244 aa)    
Predicted Functional Partners:
MFSD4B
Major facilitator superfamily domain containing 4B.
      
 0.738
WDR38
WD repeat domain 38.
      
 0.736
KNOP1
Lysine rich nucleolar protein 1.
      
 0.731
FAM133B-2
Family with sequence similarity 133 member B.
      
 0.720
FAM133B
Family with sequence similarity 133 member B.
      
 0.720
FRY
FRY microtubule binding protein.
      
 0.696
IL3RA
Interleukin 3 receptor subunit alpha.
   
  
 0.606
CD300LG
CD300 molecule like family member g.
   
  
 0.597
HSPG2
Heparan sulfate proteoglycan 2.
      
 0.586
HCFC1
Host cell factor C1.
      
 0.582
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.