STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC492026Uncharacterized protein. (608 aa)    
Predicted Functional Partners:
ALYREF
Aly/REF export factor.
    
 0.965
NXT2
Nuclear transport factor 2 like export factor 2.
    
 0.963
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.948
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.939
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.914
NXF3
Nuclear RNA export factor 3.
  
  
 
0.904
NXF1
Nuclear RNA export factor 1.
  
  
 
0.902
NUP214
Nucleoporin 214.
   
 0.857
TPR
Translocated promoter region, nuclear basket protein.
   
 0.846
NUP58
Nucleoporin 58.
    
 0.838
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.