STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNPOSynaptopodin. (1017 aa)    
Predicted Functional Partners:
NPHS2
NPHS2 stomatin family member, podocin.
      
 0.984
WT1
WT1 transcription factor.
    
 
 0.924
NPHS1
NPHS1 adhesion molecule, nephrin.
   
  
 0.748
CD2AP
CD2 associated protein.
    
 
 0.726
DDN
Dendrin.
   
  
 0.644
TRPC6
Transient receptor potential cation channel subfamily C member 6; Belongs to the transient receptor (TC 1.A.4) family.
   
  
 0.532
GAS7
Growth arrest specific 7.
    
 
 0.515
SLC12A1
Solute carrier family 12 member 1.
   
  
 0.515
SLC12A3
Solute carrier family 12 member 3.
   
  
 0.507
QDPR
Quinoid dihydropteridine reductase.
    
 
 0.490
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.