STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102153864Uncharacterized protein. (541 aa)    
Predicted Functional Partners:
LOC490877
GBD/FH3 domain-containing protein.
 
     0.923
PDZD8
PDZ domain containing 8.
      
 0.735
ZFYVE21
Zinc finger FYVE-type containing 21.
      
 0.624
PPP1R13B
Protein phosphatase 1 regulatory subunit 13B.
      
 0.564
FUNDC1
FUN14 domain containing 1.
      
 0.561
SPIRE2
Spire type actin nucleation factor 2.
    
 
 0.515
TDRD9
Tudor domain containing 9.
    
 
 0.513
CSDE1
Cold shock domain containing E1.
    
 
 0.508
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
   
 
 0.500
BAG5
BCL2 associated athanogene 5.
    
 
 0.494
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.