STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAFBScaffold attachment factor B. (1065 aa)    
Predicted Functional Partners:
ZNF699
Zinc finger protein 699.
    
 
 0.814
ZNF358
Zinc finger protein 358.
   
 
 0.804
SAFB2
Scaffold attachment factor B2.
  
  
0.686
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 
 0.655
TMPO
Thymopoietin.
   
 
 0.655
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.601
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 
 0.594
LBR
Lamin B receptor.
      
 0.530
MATR3
Uncharacterized protein.
   
 
 0.527
PSMA3
Proteasome endopeptidase complex.
   
  
 0.527
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.