STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4H5orf22Chromosome 4 C5orf22 homolog. (498 aa)    
Predicted Functional Partners:
TRMT13
tRNA methyltransferase 13 homolog.
   
  
 0.695
SAYSD1
SAYSVFN motif domain containing 1.
      
 0.675
C15H1orf109
Chromosome 15 C1orf109 homolog.
   
    0.668
CALHM4
Calcium homeostasis modulator family member 4.
   
    0.666
LOC607552
Uncharacterized protein.
   
    0.666
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.665
ACOT11
Acyl-CoA thioesterase 11.
   
    0.665
RUBCNL
Rubicon like autophagy enhancer.
   
   0.663
ZNF383
Zinc finger protein 383.
   
    0.663
RDH13
Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
    0.663
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.