STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (790 aa)    
Predicted Functional Partners:
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.771
TELO2
Telomere maintenance 2.
    
 
 0.680
CTNND1
Catenin delta 1.
   
 0.678
GDAP1L1
Ganglioside induced differentiation associated protein 1 like 1.
      
 0.673
CLSTN3
Calsyntenin 3.
   
  
 0.660
SNCAIP
Synuclein alpha interacting protein.
    
 
 0.612
JUP
Uncharacterized protein.
    
 0.611
OIT3
Oncoprotein induced transcript 3.
    
 
 0.582
MRPL48
Ribosomal_S10 domain-containing protein.
      
 0.574
RBFOX1
RNA binding fox-1 homolog 1.
      
 0.573
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.