STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL54Mitochondrial ribosomal protein L54. (138 aa)    
Predicted Functional Partners:
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.965
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.961
MRPL14
Mitochondrial ribosomal protein L14.
   
   0.958
MRPL2
Mitochondrial ribosomal protein L2.
   
 
 0.953
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.953
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.950
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.950
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.947
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.947
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.946
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.