Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APEX1 | MUTYH | ENSCAFP00000042629 | ENSCAFP00000055633 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | MutY DNA glycosylase. | 0.792 |
| APEX1 | NEIL3 | ENSCAFP00000042629 | ENSCAFP00000041964 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Nei like DNA glycosylase 3. | 0.439 |
| APEX1 | NTHL1 | ENSCAFP00000042629 | ENSCAFP00000028745 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.927 |
| APEX1 | POLD1 | ENSCAFP00000042629 | ENSCAFP00000004374 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | DNA polymerase. | 0.623 |
| APEX1 | POLE | ENSCAFP00000042629 | ENSCAFP00000056044 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.605 |
| APEX1 | TDG | ENSCAFP00000042629 | ENSCAFP00000011067 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Thymine DNA glycosylase. | 0.758 |
| ENDOV | NTHL1 | ENSCAFP00000008499 | ENSCAFP00000028745 | Endonuclease V. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.750 |
| MLH1 | MUTYH | ENSCAFP00000007136 | ENSCAFP00000055633 | MutL homolog 1. | MutY DNA glycosylase. | 0.570 |
| MLH1 | NTHL1 | ENSCAFP00000007136 | ENSCAFP00000028745 | MutL homolog 1. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.637 |
| MLH1 | POLD1 | ENSCAFP00000007136 | ENSCAFP00000004374 | MutL homolog 1. | DNA polymerase. | 0.832 |
| MLH1 | POLE | ENSCAFP00000007136 | ENSCAFP00000056044 | MutL homolog 1. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.708 |
| MLH1 | RAD17 | ENSCAFP00000007136 | ENSCAFP00000011526 | MutL homolog 1. | RAD17 checkpoint clamp loader component. | 0.403 |
| MUTYH | APEX1 | ENSCAFP00000055633 | ENSCAFP00000042629 | MutY DNA glycosylase. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.792 |
| MUTYH | MLH1 | ENSCAFP00000055633 | ENSCAFP00000007136 | MutY DNA glycosylase. | MutL homolog 1. | 0.570 |
| MUTYH | NEIL3 | ENSCAFP00000055633 | ENSCAFP00000041964 | MutY DNA glycosylase. | Nei like DNA glycosylase 3. | 0.704 |
| MUTYH | NTHL1 | ENSCAFP00000055633 | ENSCAFP00000028745 | MutY DNA glycosylase. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.673 |
| MUTYH | POLD1 | ENSCAFP00000055633 | ENSCAFP00000004374 | MutY DNA glycosylase. | DNA polymerase. | 0.688 |
| MUTYH | POLE | ENSCAFP00000055633 | ENSCAFP00000056044 | MutY DNA glycosylase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.703 |
| MUTYH | TDG | ENSCAFP00000055633 | ENSCAFP00000011067 | MutY DNA glycosylase. | Thymine DNA glycosylase. | 0.537 |
| NEIL3 | APEX1 | ENSCAFP00000041964 | ENSCAFP00000042629 | Nei like DNA glycosylase 3. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.439 |
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